Tarsier Research Project

Instructions
This research simulation will take you through a fictional example of genetic inheritance. The
textbook and lecture slides on heredity, genetics, biological evolution, and population genetics
should have all of the information that you need to successfully complete the assignment. Use
Internet resources as a last resort since that information is less controlled.
Enter your answers into the Research Simulation 1 Answer Sheet Word document and upload it
to Canvas or print out to turn in.
Assignment Start
Congratulations! You have been accepted into a prestigious research program. You will be
joining a team of primatologists who have started to conduct research on a population of tarsiers
living on an island in the Philippines. (Tarsiers are
hand-sized primates who share a distant common
ancestor with humans but evolved in their own way to
survive in forests). The researchers believe that tarsier
fur color is strongly influenced by their genes, so they
plan to genetically test tarsiers of different colors to see
what their genotypes are like.
Since you’re the newest member of the research team,
the primatologists have given you the work of
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{ Caption: A tarsier. }
preparing the data that they have collected to present to The National Science Foundation. At
least you get to work in the Philippines!
Part One
The international airport is bustling with activity as you wait for your flight to the Philippines.
Announcements in many languages ring out over the speakers. You make a small game of
trying to identify the languages being spoken. Surprisingly, you hear a young voice next to you:
“Hi are you a scientist?”
A child full of curiosity has climbed into the seat next to yours while you were distracted. You
reply to the child that you are indeed a scientist. The child looks up at your with beaming eyes. “I
have a question. In school, we learn about the scientis- scientific method, but I didn’t understand
something. Could you tell me the difference between a hyp- hypo- hypothemesis and a theory?”
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{ Your new workplace (not really). }

  1. Explain to the child the difference between a hypothesis and a theory in your own way,
    based on the book and lecture. Use at least one sentence. (3 points)
  2. The child has you attention for now. Continue by explaining how the process of scientific
    research improves our knowledge over time while bad data and theories are discarded. (3
    points)
    Satisfied, the child climbs off the seat and wanders away. Soon, the gate opens and you board
    the plane to your research adventure.
    Part Two
    By the time you are able to join the team in the Philippines, the researchers have already taken
    genetic samples of wild tarsiers. Analyzing their DNA, scientists have isolated a few genotypes,
    or the genetic makeup, or a few individuals. The genotypes have been given names following
    the standard convention of using capital and lowercase letters to represent different alleles in a
    gene.
    For each of the following four genotypes, indicate in the answer sheet whether it is
    heterozygous, homozygous dominant, or homozygous recessive: (1 point each)
  3. BB 4. ww 5. Gg
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  4. Make up your own heterozygous genotype, using a letter of your choice (1 point).
    Part Three
    The scientists noticed that the tarsiers of this particular island came in two varieties of fur color:
    brown and silver. These colors are determined by the Fur gene, which has two possible alleles.
    Comparing the fur phenotype with the genotype, they found that the uppercase ‘F’ allele codes
    for brown fur while the lowercase ‘f’ allele codes for silver fur.
    Based on this information, would the fur color of tarsiers with the following genotype be brown or
    silver? (1 point each).
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    { Caption: Photoshopped renditions of the silver and
    brown tarsiers for this assignment. Real tarsiers do
    have differences in fur color, though!}
  5. ff 8. Ff 9. FF
    Part Four
    Continuing their research, the primatologists temporarily capture a few tarsiers to observe over
    a few days. Two of the captive tarsiers, one male and one female, are very fond of each other.
    Looking at their DNA, scientists found that one has the genotype FF for the fur color gene and
    the other tarsier has ff as its genotype. One of your fellow researchers, Jherry, is filling out a
    Punnett square to diagram the possible genotypes of any offspring of this tarsier pair. He shows
    you his template:
    Jherry is eager to demonstrate what he learned when he took ANTH 101 last semester: “You
    see, each parent’s genotype is given in the gray squares. With this information, we just move
    the alleles for Parent 1 across each row and drop the alleles for Parent 2 down each column to
    see how these alleles would combine in their offspring. For this pairing…”
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    Parent 2
    F F
    Parent
    1
    f
    f
    Not to be outdone, you jump in to help Jherry figure out his Punnett square.
  6. What would be each offspring genotype in the four white blanks in the Punnett square? In
    the answer sheet write the genotype derived from the parents in each white square. (2
    points)
  7. What would be the fur color of all of these offspring, and why? Explain your reasoning with
    at least a full sentence. (2 points)
    One of the researchers, Lhindsay, comes back excitedly from the forest: “The two parent
    tarsiers had a baby!” Being a top tarsier researcher, she already has a sample of the newborn's
    DNA to test. The results show that the offspring with the genotype Ff. Lhindsay’s mind reels
    from the possibilities of this young tarsier. “What if the Ff baby grows up and mates with another
    Ff tarsier?! What types of offspring are possible?” You work to answer Lhindsay’s question by
    making another Punnett square. You start with the parents’ separated alleles in the gray
    squares and then work to fill in the four white squares with the offspring’s genotypes:
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    Parent 2
    Parent
    1
  8. What would be in each of the white squares in the answer sheet showing the possible
    genotypes of the grandchildren if the baby Ff tarsier grew up and mated with another Ff
    tarsier? (2 points)
  9. For each of the genotypes from question #12, what would be the resulting phenotype or
    actual fur color? Fill in each the correct phenotype for each white square in the Punnett
    Square with either the word ‘brown’ or ‘silver’ based on the genotype from #12. (2 points)
  10. Based on your results, which phenotype (brown or silver) would be more likely to appear in
    the grandchildren? Explain your reasoning in at least a complete sentence, explaining what
    you see in your previous answer. (3 points)
    “Thank you!” Lhindsay exclaims. She runs off to tell Jherry and the other researchers the good
    news, along with your additional information.
    Part Five
    The researchers are grateful that you have gotten this work done for them so that they can keep
    conducting fieldwork in the forest. One day, the researchers find a family of tarsiers with red fur!
    A new allele in the fur color gene must have appeared due to a change in the DNA of one of the
    tarsiers. This new allele then got passed to the next generation. Lindsay is very excited by this
    new discovery: "The red fur allele must have been created the… oh, what is the force of
    evolution that is the only source of new alleles?” The answer would be in the book Essentials of
    Biological Anthropology by Clark Spencer Larsen, if you haven’t had the lecture about that yet.
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  11. Help out Lhindsay: what is the force of
    biological evolution that is the only
    source of new alleles? (2 points)
    Observations of the red fur tarsiers show that
    they blend in better with the reddish brown
    tree trunks in the environment compared to
    both the brown and silver fur tarsiers. This
    means that the red fur tarsiers are less likely
    to be caught and eaten by the tarsier-eating
    hawks that patrol the forest.
  12. Given the above pattern over many
    generations, would the red fur tarsiers be
    more or less common compared to the
    brown and silver tarsiers? (2 points)
    You start documenting these results for the team, but you need to recall the best vocabulary
    term to describe what is going on.
  13. The change in fur color trends of the tarsier population, due to each color affecting
    reproductive success differently, is an example of which force of evolution? (2 points)
  14. You know that there are tarsiers living on the other side of the river where you found the red
    tarsiers. Due to the rapid current of the river, the tarsiers on one side rarely meet the tarsiers
    on the other. Is this an example of high or low gene flow between these two groups? (2
    points)
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    { Caption: The newly discovered red tarsier (still
    fictional for this assignment!). }
    Part Six
    After filling in the details of your report, you join the research team to eat dinner and discuss the
    findings under the big research tent. Lhindsay and Jherry thank you for being so helpful. The
    primary investigator of this team, the P.I., strolls up to you and hands you a celebratory lumpia
    (spring roll).
    “Excellent work on the tarsier fur colors. The red fur tarsiers will really add to what we know
    about this branch of primates, and all primates in general. We still don’t know if the new red fur
    allele is dominant or recessive. If it is recessive, like the f allele, then only F will be dominant for
    this gene, overriding the other alleles. If it turns out that the red fur allele is as dominant as the
    brown fur allele… what is the word for that situation?”
  15. Impress the P.I.: what is the term for a gene where multiple alleles for the same gene are
    dominant? (2 points)
  16. If the red fur allele is as dominant as the brown fur allele, what could a tarsier look like if it
    had both the red allele and the brown allele? (2 points)
    “There is a chance that the fur gene affects more than just the fur color: eye color may be
    affected as well! In that case, this one gene affects multiple traits.”
  17. What is the term for a gene that affects more than one trait? (2 points)
    “There are so many complications to genetics beyond what we just went over. I know that you
    have read the book Essentials of Biological Anthropology by Clark Spencer Larsen. He’s a great
    professor! Do you recall what the book said about regulatory and structural genes?”
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  18. What is the definition of a regulatory gene? Use a complete sentence and rephrase the
    definition from what the book says. (2 points)
  19. What is the definition of a structural gene? Use a complete sentence and rephrase the
    definition from what the book says. (2 points)
  20. What is the name for the type of gene found in many different animals that controls the
    development of body parts? (2 points)
    Your Primary Investigator nods in contentment. “It’s been great chatting with you. I’m very
    excited about analyzing these data and adding on to our scientific knowledge. To be honest, I’m
    a little competitive. Another research team may discover the same things about tarsiers and
    publish their discovery first. It’s like when Charles Darwin was almost too late in publishing his
    work on natural selection because another researcher was following the same clues to the
    same theory. Now, Darwin is the famous name for natural selection, while the other guy is less
    well known. In fact, what was his name? I’m sure Larsen mentions him in your textbook.”
  21. Who was the researcher who almost announced his discovery of natural selection before
    Charles Darwin did it? (2 points)
    Part Seven
    The next day, you stop by the nearby town of Corella to visit an Internet café and see what is
    going on with social media. You received some messages from friends asking about what you
    did recently in your research.
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  22. Write a short status message of around 100 words describing what you did and learned
    while studying tarsiers as if you were really there. College-level writing is not required! Have
    fun with it. (4 points)
    Conclusion
    The eventful field season concluded, you return home from the Philippines to turn in your
    answer sheet. The researchers continue their work on finding more about tarsiers. They can
    now test the new hypothesis that the red fur will become more common in the future. By careful
    observation of the environment, scientists can make and test hypotheses about how the tarsier
    genotype and phenotype are interrelated. This adds a little bit of new information to the existing
    scientific knowledge. We will learn more about tarsiers later in the course!
    Be sure to have answered every question in the answer sheet before submitting it on Canvas or
    turning it in on paper.
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    Caption: The public market in Corella.

Sample Solution